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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015828479.1_cds_XP_016503417.1_16965
CDS Infomation

[gene=LOC107821499] [db_xref=GeneID:107821499] [protein=pectin acetylesterase 8-like] [protein_id=XP_016503417.1] [location=complement(join(22862..22960,23080..23228,23460..23550,23669..23746,24069..24125,24219..24279,24366..24490,24833..24919,25016..25086,25189..25318,25389..25471,25578..25707,29918..30346))] [gbkey=CDS]
Sequence

ATGGATGAGTTCAGAGTAGAACAACAACAATCAATCAAACTAGAATTTGAGAATGCCGAT
GTTGTAGAAGAGATATTAGTGTCAACCAAGGACATTGAAGATACATATTTAGTTGACTCT
AGTGTCATTGGTGTTGAGGATGCTGACAGTCCCAAAGTTCTTGTAGTTGAGCGCATTGGT
CCATACTCCAAAATTTTTTCCACATTGTGTTTGGATAATGATATGGAAATAAAGTCATCT
GAACCAATTGAGGAGTCAAGCAATGAGGAACAAGGTGCATATATTCTGGAATTCTTCTTA
CCAGAAAGTCAGGATTACACACCTCATGTAAAGGCCAAGAAGCGTAGAAGATTACACTGT
TCCCTAGGGCCAATTAGATTTGCTCCACCACCCCTGGAGCATAACCGGAAACTTGAAGCC
AAAATGGGGCTGAAGAAAATCACATCGGAGCAAAATGTTCCTAATATTTATGGTACTCCT
TTTGACTATTTCTCAAGTCAGTGCACAATTTTAATAGTCAATACGACTATACTTCACAGT
GCAATTGAAAAGGGAGCCGTTTGTTTGGACGGAAGTCCTCCTGCATACCTGATTGATAGG
GGAAGTGGCTATGGAGTTAATAATTGGCTTATTCACATTGAGGGAGGGGGATGGTGTTCT
ACGATATCAGAGTGCATCAAACGTACCGGTACTAGGTATGGATCATCAATACACATGGAG
GATCAATATTATTTTCAAGGAATTTTAAGCAACAAGCCTAACGAAAATCCAGACTTTTTA
AACTGGAATAGAGTAAAGGTTAAGTATTGCGATGGGGCATCTTTTACCGGTGACGTTGAA
GAAGTTACAGGGCTGCACTTCAGAGGAGCAAGAGTTTTCCTTGCCATCATGGAGGATTTA
TTATACAAAGGAATGTGGAAAGCTGAAAATGCCATTTTGAGTGGAACTTCAGCAGGGGGA
TTAACTGCAATACTACATTGTGACAAGTTTAGAAGTTTTTTCTCCACAAATGCTAGAGTT
AAATGCATTTCTGATGCTGGTTTCTTTGTAAATATAAAAACAATCCTAGGGGAACCACAT
ATTAAGCAGCTATATGAAAGAGTTGTTACATTGCACGGATCAACCAAGAACCTGCCACGA
TCTTGCACCAGCTCCTACTTAGATCCAAGTTTGTGCTTCTTCCCTGAGTATGTAGTACAA
CATATTCGGACCCCACTTTTCGTTATTAATTCGGCTTATGACTCTTGGCAGATAAATAAC
AGCTTGATTCCTTATAATAACTGGAGGTACTGCAAGAAAGATATAAATGTATGCTCACCA
AGTCAAATCCAAACTCTCCAAGATTTCAGGGTAATATTTATAAGGGCAGTTATAAATGGA
ATAAGACTAACTTCAGCAAGTGGATATTTCATAACCTCCTGCCATTCCCACAAGGGCATT
GAAACACCCAGCTATTGGTTCTACCCCAACTCTCCTACATTGGTTAATAAGGCTATTGCT
CAAGCAGTTGGTGAGTGGTTTTTTGTTGAGAGTATTAGATTCCAAGAAATATCTTGTCCT
TATCCTTGTGGAAAATTTTGCCAAAGCTAG

Peptide Sequence

PEP ID

XP_016503417.1
PEP Infomation

PREDICTED: pectin acetylesterase 8-like [Nicotiana tabacum]
Sequence

MDEFRVEQQQSIKLEFENADVVEEILVSTKDIEDTYLVDSSVIGVEDADSPKVLVVERIG
PYSKIFSTLCLDNDMEIKSSEPIEESSNEEQGAYILEFFLPESQDYTPHVKAKKRRRLHC
SLGPIRFAPPPLEHNRKLEAKMGLKKITSEQNVPNIYGTPFDYFSSQCTILIVNTTILHS
AIEKGAVCLDGSPPAYLIDRGSGYGVNNWLIHIEGGGWCSTISECIKRTGTRYGSSIHME
DQYYFQGILSNKPNENPDFLNWNRVKVKYCDGASFTGDVEEVTGLHFRGARVFLAIMEDL
LYKGMWKAENAILSGTSAGGLTAILHCDKFRSFFSTNARVKCISDAGFFVNIKTILGEPH
IKQLYERVVTLHGSTKNLPRSCTSSYLDPSLCFFPEYVVQHIRTPLFVINSAYDSWQINN
SLIPYNNWRYCKKDINVCSPSQIQTLQDFRVIFIRAVINGIRLTSASGYFITSCHSHKGI
ETPSYWFYPNSPTLVNKAIAQAVGEWFFVESIRFQEISCPYPCGKFCQS

Transcript Sequence

Gene sequence data has not been registered.